BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F03SP1|AL428083
(736 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1456 0.0
>3x_Contig1807
Length = 66587
Score = 1456 bits (734), Expect = 0.0
Identities = 735/736 (99%)
Strand = Plus / Minus
Query: 1 gatccgatttcgagacgaaacaaaatgcataactgaaccaatcacgtgattgtaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7980 gatccgatttcgagacgaaacaaaatgcataactgaaccaatcacgtgattgtaatatgt 7921
Query: 61 gcgaaattttgacacatttaatagtagagcctcaaattatacacacaacaactccagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7920 gcgaaattttgacacatttaatagtagagcctcaaattatacacacaacaactccagcag 7861
Query: 121 ctaacctgaggtagttcacgataagctgcacatcgcctatggtaggaggtatttcgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7860 ctaacctgaggtagttcacgataagctgcacatcgcctatggtaggaggtatttcgtcac 7801
Query: 181 cgtcgtcataagactcgaaagaggcaatagtttccagctccttctcaatgtagtcaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7800 cgtcgtcataagactcgaaagaggcaatagtttccagctccttctcaatgtagtcaacca 7741
Query: 241 atttctgcaaatatttagatttgaccaaacaattgttctagacaaggcaccaccacactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7740 atttctgcaaatatttagatttgaccaaacaattgttctagacaaggcaccaccacactt 7681
Query: 301 caatgttcttagcagctcttggtaggtaccgtgttgcttttctcctcatcacaaagagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7680 caatgttcttagcagctcttggtaggtaccgtgttgcttttctcctcatcacaaagagat 7621
Query: 361 aggaaaaacgtcttagatcttcgggactgcgggtcgagcaatacagcacggcacgcaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7620 aggaaaaacgtcttagatcttcgggactgcgggtcgagcaatacagcacggcacgcaaag 7561
Query: 421 ctttacattgtttggctgttttgggtcggctcataaccttccttttgtttttcggaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7560 ctttacattgtttggctgttttgggtcggctcataaccttccttttgtttttcggaaacc 7501
Query: 481 actgcgtaattttcttagagacttcccctctcggcttaatgttttaagcttttttagtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7500 actgcgtaattttcttagagacttcccctctcggcttaatgttttaagcttttttagtaa 7441
Query: 541 ataatctgattacggaatgcaacatgagaacttcagtacagtgcgcagagattgaagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7440 ataatctgattacggaatgcaacatgagaacttcagtacagtgcgcagagattgaagttt 7381
Query: 601 ttcacaatgaatattggaacattttaaacttcttcgcacagacacaattgcagatatcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7380 ttcacaatgaatattggaacattttaaacttcttcgcacagacacaattgcagatatcaa 7321
Query: 661 actccaagtggacttttcccacgagagaattgcagaatatggcacaatgcggacgatacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7320 actccaagtggacttttcccacgagagaattgcagaatatggcacaatgcggacgatacg 7261
Query: 721 gaacataaggcctkga 736
||||||||||||| ||
Sbjct: 7260 gaacataaggcctgga 7245
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4964
Number of Sequences: 1807
Number of extensions: 4964
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 736
length of database: 10,358,551
effective HSP length: 16
effective length of query: 720
effective length of database: 10,329,639
effective search space: 7437340080
effective search space used: 7437340080
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)